EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0, Biotinylated
{"url":"https://www.epicypher.com/products/nucleosomes/epidyne-chromatin-remodeling-substrates/epidyne-remodeling-assay-substrate-dna-st601-gatc0-biotinylated","add_this":[{"service":"facebook","annotation":""},{"service":"email","annotation":""},{"service":"print","annotation":""},{"service":"twitter","annotation":""},{"service":"linkedin","annotation":""}],"gtin":null,"id":873,"bulk_discount_rates":[],"can_purchase":true,"meta_description":"EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0, Biotinylated (Positive Control)","category":["Nucleosomes/EpiDyne® Chromatin Remodeling Substrates","Nucleosomes/Nucleosome Components and Subunits"],"AddThisServiceButtonMeta":"","main_image":{"data":"https://cdn11.bigcommerce.com/s-y9o92/images/stencil/{:size}/products/873/900/DNA__13746.1569012501.190.250__90864.1626713525.gif?c=2","alt":"EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0, Biotinylated"},"add_to_wishlist_url":"/wishlist.php?action=add&product_id=873","shipping":{"calculated":true},"num_reviews":0,"weight":"0.00 LBS","custom_fields":[{"id":"894","name":"Pack Size","value":"50 µg"}],"sku":"18-4110","description":"<div class=\"service_accordion product-droppdown\">\n <div class=\"container\">\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel current\">\n <h3 class=\"sub-title1\">Description</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description-specific\n \"\n >\n <p>\n EpiDyne<sup>®</sup> Remodeling Assay Substrate DNA ST601-GATC0 is a\n 217 base-pair double-stranded DNA fragment containing the 601\n nucleosome positioning sequence [1], which has high affinity for\n histone octamers and is useful for nucleosome assembly. The DNA also\n includes a 3’ acceptor sequence to accommodate the histone octamer\n subsequent to remodeling. This negative control does not contain\n DpnII restriction sites. When paired with the positive control DNA\n (Catalog No.\n <a\n href=\"/products/nucleosomes/epidyne-chromatin-remodeling-substrates/epidyne-remodeling-assay-substrate-dna-st601-gatc1-biotinylated\"\n >18-4111</a\n >) these controls illustrate the migration range for the Restriction\n Enzyme Assay. See the EpiDyne Nucleosome Remodeling Assay Tech Note\n (Restriction Enzyme Assay) for more information view our\n <a href=\"/resources/technical-notes/\">Technical Notes</a>.\n </p>\n </div>\n </div>\n </div>\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel current\">\n <h3 class=\"sub-title1\">Validation Data</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description-specific\n \"\n >\n <section class=\"image-picker\">\n <div class=\"image-picker__left\">\n <div\n class=\"\n image-picker__main-content_active image-picker__main-content\n \"\n >\n <div class=\"image-picker__header-content\">\n <button class=\"image-picker__left-arrow\">\n <svg\n class=\"image-picker__svg-left\"\n width=\"24\"\n height=\"24\"\n viewBox=\"0 0 24 24\"\n >\n <path\n d=\"M16.67 0l2.83 2.829-9.339 9.175 9.339 9.167-2.83 2.829-12.17-11.996z\"\n />\n </svg>\n </button>\n <a\n href=\"/content/images/products/nucleosomes/18-4110-dna-gel-data.jpeg\"\n target=\"_blank\"\n class=\"image-picker__main-image-link\"\n ><img\n alt=\"18-4110-dna-gel-data\"\n src=\"/content/images/products/nucleosomes/18-4110-dna-gel-data.jpeg\"\n class=\"image-picker__main-image\"\n />\n <span class=\"image-picker__main-image-caption\"\n >(Click to enlarge)</span\n ></a\n >\n <button class=\"image-picker__right-arrow\">\n <svg\n class=\"image-picker__svg-right\"\n width=\"24\"\n height=\"24\"\n viewBox=\"0 0 24 24\"\n >\n <path\n d=\"M7.33 24l-2.83-2.829 9.339-9.175-9.339-9.167 2.83-2.829 12.17 11.996z\"\n />\n </svg>\n </button>\n </div>\n <p>\n <span class=\"image-picker__span-content\"\n ><strong>Figure 1: DNA Gel Data </strong><br />\n ST601-GATC0 DNA resolved via native PAGE gel and stained\n with ethidium bromide to visualize DNA.\n <strong>Lane 1:</strong> Free DNA (200 ng).\n <strong>Lane 2:</strong> Free DNA incubated with 10U DpnII\n for 1 hr at 37°C (200 ng). <strong>Lane 3:</strong> Free DNA\n incubated with 10U MfeI for 1 hr at 37°C (200 ng). Migration\n patterns of DNA molecular weight markers are indicated.\n </span>\n </p>\n </div>\n </div>\n <aside class=\"image-picker__right\">\n <div class=\"image-picker__gallery\">\n <img\n alt=\"18-4110-dna-gel-data\"\n src=\"/content/images/products/nucleosomes/18-4110-dna-gel-data.jpeg\"\n width=\"200\"\n class=\"\n image-picker__side-image image-picker__side-image_active\n \"\n role=\"button\"\n />\n </div>\n </aside>\n </section>\n </div>\n </div>\n </div>\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel\">\n <h3 class=\"sub-title1\">Technical Information</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description\n \"\n >\n <div class=\"product-tech-info\">\n <div class=\"product-tech-info__line-item\">\n <div class=\"product-tech-info__line-item-left\">\n <b>Formulation</b>\n </div>\n <div class=\"product-tech-info__line-item-right\">\n 50 µg lyophilized ST601-GATC0 DNA.\n </div>\n </div>\n <div class=\"product-tech-info__line-item\">\n <div class=\"product-tech-info__line-item-left\">\n <b>Storage and Stability</b>\n </div>\n <div class=\"product-tech-info__line-item-right\">\n Stable for six 2 years at -20°C from date of receipt. After\n resuspending, aliquots should be stored at -80°C.\n </div>\n </div>\n </div>\n </div>\n </div>\n </div>\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel\">\n <h3 class=\"sub-title1\">Application Notes</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description\n \"\n >\n <p>\n ST601-GATC0 DNA is useful as a negative control for restriction\n enzyme accessibility nucleosome remodeling assays using the EpiDyne\n Remodeling Assay Substrate. No DpnII restriction enzyme site is\n present, while the naturally occurring MfeI (AATTGG in bold) remains\n present within the 601 sequence.\n </p>\n </div>\n </div>\n </div>\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel\">\n <h3 class=\"sub-title1\">DNA Sequence</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description\n \"\n >\n <p>\n GAATTCATCAGAATCCCGGTGCCGAGGCCGCTC<strong>AATTGG</strong>TCGTAGAC\n AGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTT\n AACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATAT\n ATACATCGATGATGATGGATAGATGGATGATGGATGGATGGATGATG\n ATGGATGAATAGATGGATGGATGAAGCTT\n </p>\n </div>\n </div>\n </div>\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel\">\n <h3 class=\"sub-title1\">References</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description\n \"\n >\n <strong>Background References:</strong>\n <br />\n [1] Lowary & Widom <em>J. Mol. Biol.</em> (1998). PMID:\n <a\n href=\"https://pubmed.ncbi.nlm.nih.gov/9514715/\"\n target=\"_blank\"\n title=\"New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning\"\n >9514715</a\n ><br />\n </div>\n </div>\n </div>\n <div id=\"prodAccordion\">\n <div id=\"ProductDescription\" class=\"Block Panel\">\n <h3 class=\"sub-title1\">Documents & Resources</h3>\n <div\n class=\"\n ProductDescriptionContainer\n product-droppdown__section-description\n \"\n >\n <div class=\"product-documents\">\n <a\n href=\"/content/documents/tds/18-4110.pdf\"\n target=\"_blank\"\n class=\"product-documents__link\"\n >\n <svg\n version=\"1.1\"\n id=\"Layer_1\"\n xmlns=\"http://www.w3.org/2000/svg\"\n xmlns:xlink=\"http://www.w3.org/1999/xlink\"\n x=\"0px\"\n y=\"0px\"\n viewBox=\"0 0 228 240\"\n style=\"enable-background: new 0 0 228 240\"\n xml:space=\"preserve\"\n class=\"product-documents__icon\"\n alt=\"16-0030 Datasheet\"\n >\n <g>\n <path\n class=\"product-documents__svg-pdf\"\n d=\"M191.92,68.77l-47.69-47.69c-1.33-1.33-3.12-2.08-5.01-2.08H45.09C41.17,19,38,22.17,38,26.09v184.36\n c0,3.92,3.17,7.09,7.09,7.09h141.82c3.92,0,7.09-3.17,7.09-7.09V73.8C194,71.92,193.25,70.1,191.92,68.77z M177.65,77.06h-41.7\n v-41.7L177.65,77.06z M178.05,201.59H53.95V34.95h66.92v47.86c0,5.14,4.17,9.31,9.31,9.31h47.86V201.59z\"\n />\n </g>\n <rect\n x=\"20\"\n y=\"112\"\n class=\"product-documents__svg-background\"\n width=\"146\"\n height=\"76\"\n />\n <g>\n <path\n class=\"product-documents__svg-pdf\"\n d=\"M23.83,125.68h22.36c5.29,0,9.41,1.33,12.35,4c2.94,2.67,4.42,6.39,4.42,11.18c0,4.78-1.47,8.51-4.42,11.18\n c-2.94,2.67-7.06,4-12.35,4H34.59v18.29H23.83V125.68z M44.81,147.9c5.38,0,8.07-2.32,8.07-6.97c0-2.39-0.67-4.16-2-5.31\n c-1.33-1.15-3.36-1.73-6.07-1.73H34.59v14.01H44.81z\"\n />\n <path\n class=\"product-documents__svg-pdf\"\n d=\"M69.92,125.68h18.91c5.29,0,9.84,0.97,13.66,2.9c3.82,1.93,6.74,4.72,8.76,8.35\n c2.02,3.63,3.04,7.98,3.04,13.04c0,5.06-1,9.42-3,13.08c-2,3.66-4.91,6.45-8.73,8.38c-3.82,1.93-8.4,2.9-13.73,2.9H69.92V125.68z\n M88.07,165.63c10.35,0,15.52-5.22,15.52-15.66c0-10.4-5.17-15.59-15.52-15.59h-7.38v31.26H88.07z\"\n />\n <path\n class=\"product-documents__svg-pdf\"\n d=\"M122.57,125.68h32.84v8.49h-22.22v11.18h20.84v8.49h-20.84v20.49h-10.63V125.68z\"\n />\n </g>\n </svg>\n <span class=\"product-documents__info\">Technical Datasheet</span>\n </a>\n </div>\n </div>\n </div>\n </div>\n </div>\n</div>\n","tags":[],"warranty":"","price":{"without_tax":{"formatted":"$115.00","value":115,"currency":"USD"},"tax_label":"Sales Tax"},"detail_messages":"","availability":"","page_title":"EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0, Biotinylated (Positive Control)","cart_url":"https://www.epicypher.com/cart.php","max_purchase_quantity":0,"mpn":null,"upc":null,"options":[],"related_products":[{"id":373,"sku":"18-4100","name":"EpiDyne® Remodeling Assay Substrate DNA 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EpiD","image":{"data":"https://cdn11.bigcommerce.com/s-y9o92/images/stencil/{:size}/products/869/970/epidyne-remodeling-assay-substrate-dna-st601-gatc1-biotinylated__84056.1645734562.jpg?c=2","alt":"EpiDyne Remodeling Assay Substrate DNA ST601-GATC1, Biotinylated"},"images":[{"data":"https://cdn11.bigcommerce.com/s-y9o92/images/stencil/{:size}/products/869/970/epidyne-remodeling-assay-substrate-dna-st601-gatc1-biotinylated__84056.1645734562.jpg?c=2","alt":"EpiDyne Remodeling Assay Substrate DNA ST601-GATC1, Biotinylated"}],"date_added":"12th Jul 2021","pre_order":false,"show_cart_action":true,"has_options":false,"stock_level":null,"low_stock_level":null,"qty_in_cart":0,"custom_fields":[{"id":882,"name":"Pack Size","value":"50 µg"},{"id":883,"name":"Internal Comment","value":"waiting on full webpage to be made by Website Team."}],"num_reviews":null,"weight":{"formatted":"0.01 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Substrate ST601-GATC1, EpiDyne, chromatin remodeling, chromatin remodeler, swi.snf, swi, snf, chrac, rsc, SMARCA, BRM1, BRG1, nucleosome remodeling, nucleosome sliding, sliding, restriction enzyme assay, DAM methyltransferase assay","show_quantity_input":1,"title":"EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0, Biotinylated","gift_wrapping_available":false,"min_purchase_quantity":0,"customizations":[],"images":[{"data":"https://cdn11.bigcommerce.com/s-y9o92/images/stencil/{:size}/products/873/900/DNA__13746.1569012501.190.250__90864.1626713525.gif?c=2","alt":"EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0, Biotinylated"}]} Pack Size: 50 µg
Description
EpiDyne® Remodeling Assay Substrate DNA ST601-GATC0 is a 217 base-pair double-stranded DNA fragment containing the 601 nucleosome positioning sequence [1], which has high affinity for histone octamers and is useful for nucleosome assembly. The DNA also includes a 3’ acceptor sequence to accommodate the histone octamer subsequent to remodeling. This negative control does not contain DpnII restriction sites. When paired with the positive control DNA (Catalog No. 18-4111) these controls illustrate the migration range for the Restriction Enzyme Assay. See the EpiDyne Nucleosome Remodeling Assay Tech Note (Restriction Enzyme Assay) for more information view our Technical Notes.
Validation Data
Figure 1: DNA Gel Data
ST601-GATC0 DNA resolved via native PAGE gel and stained
with ethidium bromide to visualize DNA.
Lane 1: Free DNA (200 ng).
Lane 2: Free DNA incubated with 10U DpnII
for 1 hr at 37°C (200 ng). Lane 3: Free DNA
incubated with 10U MfeI for 1 hr at 37°C (200 ng). Migration
patterns of DNA molecular weight markers are indicated.
Technical Information
Application Notes
ST601-GATC0 DNA is useful as a negative control for restriction enzyme accessibility nucleosome remodeling assays using the EpiDyne Remodeling Assay Substrate. No DpnII restriction enzyme site is present, while the naturally occurring MfeI (AATTGG in bold) remains present within the 601 sequence.
DNA Sequence
GAATTCATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGAC AGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTT AACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATAT ATACATCGATGATGATGGATAGATGGATGATGGATGGATGGATGATG ATGGATGAATAGATGGATGGATGAAGCTT